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1

Food chemistry: Acrylamide from Maillard reaction products

Stadler, Richard H., Blank, Imre, Varga, Natalia, Robert, Fabien, Hau, Jörg, Guy, Philippe A., Robert, Marie-Claude, Riediker, Sonja

Journal:

Year:

2002

Language:

english

File:

PDF, 123 KB

english, 2002

2

The challenges and scope of theoretical biology

David C. Krakauer, James P. Collins, Douglas Erwin, Jessica C. Flack, Walter Fontana, Manfred D. Laubichler, Sonja J. Prohaska, Geoffrey B. West, Peter F. Stadler

Journal:

Journal of Theoretical Biology

Year:

2011

Language:

english

File:

PDF, 245 KB

english, 2011

3

Exclusion of repetitive DNA elements from gnathostome Hox clusters

Claudia Fried, Sonja J. Prohaska, Peter F. Stadler

Journal:

Journal of Experimental Zoology Part B: Molecular and Developmental Evolution

Year:

2004

Language:

english

File:

PDF, 444 KB

english, 2004

4

Determination of chlormequat and mepiquat in pear, tomato, and wheat flour using on-line solid-phase extraction (Prospekt) coupled with liquid chromatography–electrospray ionization tandem mass spectrometry

Sonja Riediker, Heinrich Obrist, Natalia Varga, Richard H Stadler

Journal:

Journal of Chromatography A

Year:

2002

Language:

english

File:

PDF, 499 KB

english, 2002

5

Microwave-enhanced reactions under open and closed vessel conditions. A case study

Alexander Stadler, Sonja Pichler, Gabriela Horeis, C.Oliver Kappe

Journal:

Year:

2002

Language:

english

File:

PDF, 152 KB

english, 2002

6

Peer-Victimization and Mental Health Problems in Adolescents: Are Parental and School Support Protective?

Christina Stadler, Julia Feifel, Sonja Rohrmann, Robert Vermeiren, Fritz Poustka

Journal:

Child Psychiatry & Human Development

Year:

2010

Language:

english

File:

PDF, 431 KB

english, 2010

7

Molecular characterization of subcutaneous panniculitis-like T-cell lymphoma reveals upregulation of immunosuppression- and autoimmunity-associated genes

Maliniemi, Pilvi, Hahtola, Sonja, Ovaska, Kristian, Jeskanen, Leila, Väkevä, Liisa, Jäntti, Kirsi, Stadler, Rudolf, Michonneau, David, Fraitag, Sylvie, Hautaniemi, Sampsa, Ranki, Annamari

Journal:

Orphanet Journal of Rare Diseases

Year:

2014

Language:

english

File:

PDF, 2.79 MB

english, 2014

8

The relativity of biological function

Laubichler, Manfred D., Stadler, Peter F., Prohaska, Sonja J., Nowick, Katja

Journal:

Theory in Biosciences

Year:

2015

Language:

english

File:

PDF, 349 KB

english, 2015

9

Newborn screening for 3-methylcrotonyl-CoA carboxylase deficiency: population heterogeneity of MCCA and MCCB mutations and impact on risk assessment

Sonja C. Stadler, Roman Polanetz, Esther M. Maier, Sylvia C. Heidenreich, Birgit Niederer, Peter U. Mayerhofer, Florian Lagler, Hans-Georg Koch, René Santer, Janice M. Fletcher, Enzo Ranieri, Anibh M.

Journal:

Year:

2006

Language:

english

File:

PDF, 317 KB

english, 2006

10

Evolution of the vertebrate parahox clusters

Sonja J. Prohaska, Peter F. Stadler

Journal:

Journal of Experimental Zoology Part B: Molecular and Developmental Evolution

Year:

2006

Language:

english

File:

PDF, 144 KB

english, 2006

11

The amphioxus Hox cluster: characterization, comparative genomics, and evolution

Chris T. Amemiya, Sonja J. Prohaska, Alicia Hill-Force, April Cook, Jessica Wasserscheid, David E.K. Ferrier, Juan Pascual-Anaya, Jordi Garcia-Fernàndez, Ken Dewar, Peter F. Stadler

Journal:

Journal of Experimental Zoology Part B: Molecular and Developmental Evolution

Year:

2008

Language:

english

File:

PDF, 370 KB

english, 2008

12

Hox clusters of the bichir (Actinopterygii, Polypterus senegalus) highlight unique patterns of sequence evolution in gnathostome phylogeny

Jeremy D. Raincrow, Ken Dewar, Claudia Stocsits, Sonja J. Prohaska, Chris T. Amemiya, Peter F. Stadler, Chi-Hua Chiu

Journal:

Journal of Experimental Zoology Part B: Molecular and Developmental Evolution

Year:

2011

Language:

english

File:

PDF, 456 KB

english, 2011

13

Independent Hox-cluster duplications in lampreys

Claudia Fried, Sonja J. Prohaska, Peter F. Stadler

Journal:

Journal of Experimental Zoology Part B: Molecular and Developmental Evolution

Year:

2003

Language:

english

File:

PDF, 225 KB

english, 2003

14

Cold-temperature stability of five β-lactam antibiotics in bovine milk and milk extracts prepared for liquid chromatography–electrospray ionization tandem mass spectrometry analysis

Sonja Riediker, Andreas Rytz, Richard H. Stadler

Journal:

Journal of Chromatography A

Year:

2004

Language:

english

File:

PDF, 88 KB

english, 2004

15

Discovering cis-regulatory modules by optimizing barbecues

Axel Mosig, Türker Bıyıkoğlu, Sonja J. Prohaska, Peter F. Stadler

Journal:

Discrete Applied Mathematics

Year:

2009

Language:

english

File:

PDF, 900 KB

english, 2009

16

The duplication of theHoxgene clusters in teleost fishes

Sonja J. Prohaska, Peter F. Stadler

Journal:

Theory in Biosciences

Year:

2004

Language:

english

File:

PDF, 342 KB

english, 2004

17

Evolutionary patterns of non-coding RNAs

Athanasius F. Bompfünewerer, Christoph Flamm, Claudia Fried, Guido Fritzsch, Ivo L. Hofacker, Jörg Lehmann, Kristin Missal, Axel Mosig, Bettina Müller, Sonja J. Prohaska, Bärbel M.R. Stadler, Peter F.

Journal:

Theory in Biosciences

Year:

2005

Language:

english

File:

PDF, 1.33 MB

english, 2005

18

Surveying phylogenetic footprints in large gene clusters: applications to Hox cluster duplications

Sonja J. Prohaska, Claudia Fried, Christoph Flamm, Günter P. Wagner, Peter F. Stadler

Journal:

Molecular Phylogenetics and Evolution

Year:

2004

Language:

english

File:

PDF, 638 KB

english, 2004

19

Evidence for independent Hox gene duplications in the hagfish lineage: a PCR-based gene inventory of Eptatretus stoutii

Peter F. Stadler, Claudia Fried, Sonja J. Prohaska, Wendy J. Bailey, Bernhard Y. Misof, Frank H. Ruddle, Günter P. Wagner

Journal:

Molecular Phylogenetics and Evolution

Year:

2004

Language:

english

File:

PDF, 765 KB

english, 2004

20

Determination of the plant growth regulator chlormequat in food by liquid chromatography–electrospray ionisation tandem mass spectrometry

Jörg Hau, Sonja Riediker, Natalia Varga, Richard H Stadler

Journal:

Journal of Chromatography A

Year:

2000

Language:

english

File:

PDF, 294 KB

english, 2000

21

Analysis of acrylamide in food by isotope-dilution liquid chromatography coupled with electrospray ionization tandem mass spectrometry

Sonja Riediker, Richard H. Stadler

Journal:

Journal of Chromatography A

Year:

2003

Language:

english

File:

PDF, 151 KB

english, 2003

22

The architecture of chicken chromosome territories changes during differentiation

Sonja Stadler, Verena Schnapp, Robert Mayer, Stefan Stein, Christoph Cremer, Constanze Bonifer, Thomas Cremer, Steffen Dietzel

Journal:

BMC Cell Biology

Year:

2004

Language:

english

File:

PDF, 3.14 MB

english, 2004

23

Molecular Evolution of Duplicated Ray Finned Fish HoxA Clusters: Increased Synonymous Substitution Rate and Asymmetrical Co-divergence of Coding and Non-coding Sequences

Günter P. Wagner, Kazuhiko Takahashi, Vincent Lynch, Sonja J. Prohaska, Claudia Fried, Peter F. Stadler, Chris Amemiya

Journal:

Journal of Molecular Evolution

Year:

2005

Language:

english

File:

PDF, 189 KB

english, 2005

24

“Hypothesis for the Modern RNA World”: ApervasiveNon-coding RNA-Based Genetic Regulation is a Prerequisite for the Emergence of Multicellular Complexity

Irma Lozada-Chávez, Peter F. Stadler, Sonja J. Prohaska

Journal:

Origins of Life and Evolution of Biospheres

Year:

2011

Language:

english

File:

PDF, 585 KB

english, 2011

25

“Genes”

Sonja J. Prohaska, Peter F. Stadler

Journal:

Theory in Biosciences

Year:

2008

Language:

english

File:

PDF, 200 KB

english, 2008

26

Defining genes: a computational framework

Peter F. Stadler, Sonja J. Prohaska, Christian V. Forst, David C. Krakauer

Journal:

Theory in Biosciences

Year:

2009

Language:

english

File:

PDF, 293 KB

english, 2009

27

Innovation in gene regulation: The case of chromatin computation

Sonja J. Prohaska, Peter F. Stadler, David C. Krakauer

Journal:

Journal of Theoretical Biology

Year:

2010

Language:

english

File:

PDF, 831 KB

english, 2010

28

Simultaneous Determination of Five β-Lactam Antibiotics in Bovine Milk Using Liquid Chromatography Coupled with Electrospray Ionization Tandem Mass Spectrometry

Riediker, Sonja, Stadler, Richard H.

Journal:

Analytical Chemistry

Year:

2001

Language:

english

File:

PDF, 112 KB

english, 2001

29

Proteinortho: Detection of (Co-)orthologs in large-scale analysis

Marcus Lechner, Sven Findeiß, Lydia Steiner, Manja Marz, Peter F Stadler, Sonja J Prohaska

Journal:

BMC Bioinformatics

Year:

2011

Language:

english

File:

PDF, 475 KB

english, 2011

30

SynBlast: Assisting the analysis of conserved synteny information

Jörg Lehmann, Peter F Stadler, Sonja J Prohaska

Journal:

BMC Bioinformatics

Year:

2008

Language:

english

File:

PDF, 797 KB

english, 2008

31

Genomic organization of eukaryotic tRNAs

Clara Bermudez-Santana, Camille Stephan-Otto Attolini, Toralf Kirsten, Jan Engelhardt, Sonja J Prohaska, Stephan Steigele, Peter F Stadler

Journal:

Year:

2010

Language:

english

File:

PDF, 1.19 MB

english, 2010

32

Computational RNomics of Drosophilids

Dominic Rose, Jörg Hackermüller, Stefan Washietl, Kristin Reiche, Jana Hertel, Sven Findeiß, Peter F Stadler, Sonja J Prohaska

Journal:

Year:

2007

Language:

english

File:

PDF, 432 KB

english, 2007

33

Mimicry of human IgE epitopes by anti-idiotypic antibodies

Monique Vogel, Sylvia Miescher, Sonja Kuhn, Adrian W. Zürcher, Michael B. Stadler, Christine Ruf, Friedrich Effenberger, Franz Kricek, Beda M. Stadler

Journal:

Journal of Molecular Biology

Year:

2000

Language:

english

File:

PDF, 354 KB

english, 2000

34

Mitochondrial targeting signals and mature peptides of 3-methylcrotonyl-CoA carboxylase

Sonja C. Stadler, Roman Polanetz, Stephan Meier, Peter U. Mayerhofer, Johannes M. Herrmann, Katja Anslinger, Adelbert A. Roscher, Wulf Röschinger, Andreas Holzinger

Journal:

Biochemical and Biophysical Research Communications

Year:

2005

Language:

english

File:

PDF, 626 KB

english, 2005

35

Protein-coding structured RNAs: A computational survey of conserved RNA secondary structures overlapping coding regions in drosophilids

Sven Findeiß, Jan Engelhardt, Sonja J. Prohaska, Peter F. Stadler

Journal:

Year:

2011

Language:

english

File:

PDF, 540 KB

english, 2011

36

Distinct Factors Control Histone Variant H3.3 Localization at Specific Genomic Regions

Aaron D. Goldberg, Laura A. Banaszynski, Kyung-Min Noh, Peter W. Lewis, Simon J. Elsaesser, Sonja Stadler, Scott Dewell, Martin Law, Xingyi Guo, Xuan Li, Duancheng Wen, Ariane Chapgier, Russell C. DeK

Journal:

Year:

2010

Language:

english

File:

PDF, 1.38 MB

english, 2010

37

Multiple Interactions Recruit MLL1 and MLL1 Fusion Proteins to the HOXA9 Locus in Leukemogenesis

Thomas A. Milne, Jaehoon Kim, Gang G. Wang, Sonja C. Stadler, Venkatesha Basrur, Sarah J. Whitcomb, Zhanxin Wang, Alexander J. Ruthenburg, Kojo S.J. Elenitoba-Johnson, Robert G. Roeder, C. David Allis

Journal:

Year:

2010

Language:

english

File:

PDF, 1.01 MB

english, 2010

38

Linking epithelial-to-mesenchymal-transition and epigenetic modifications

Stadler, Sonja C., Allis, C. David

Journal:

Seminars in Cancer Biology

Year:

2012

Language:

english

File:

PDF, 359 KB

english, 2012

39

Chromatin computation: Epigenetic inheritance as a pattern reconstruction problem

Arnold, Christian, Stadler, Peter F., Prohaska, Sonja J.

Journal:

Journal of Theoretical Biology

Year:

2013

Language:

english

File:

PDF, 1.75 MB

english, 2013

40

In-Depth Mechanistic Study on the Formation of Acrylamide and Other Vinylogous Compounds by the Maillard Reaction

Stadler, Richard H., Robert, Fabien, Riediker, Sonja, Varga, Natalia, Davidek, Tomas, Devaud, Stéphanie, Goldmann, Till, Hau, Jörg, Blank, Imre

Journal:

Journal of Agricultural and Food Chemistry

Year:

2004

Language:

english

File:

PDF, 161 KB

english, 2004

41

Characterization of Volatile Organic Compounds from Human Analogue Decomposition Using Thermal Desorption Coupled to Comprehensive Two-Dimensional Gas Chromatography–Time-of-Flight Mass Spectrometry

Stadler, Sonja, Stefanuto, Pierre-Hugues, Brokl, Michał, Forbes, Shari L., Focant, Jean-François

Journal:

Analytical Chemistry

Year:

2013

Language:

english

File:

PDF, 888 KB

english, 2013

42

Improved Sample Preparation to Determine Acrylamide in Difficult Matrixes Such as Chocolate Powder, Cocoa, and Coffee by Liquid Chromatography Tandem Mass Spectroscopy

Delatour, Thierry, Périsset, Adrienne, Goldmann, Till, Riediker, Sonja, Stadler, Richard H.

Journal:

Journal of Agricultural and Food Chemistry

Year:

2004

Language:

english

File:

PDF, 118 KB

english, 2004

43

Analysis of synthetic canine training aids by comprehensive two-dimensional gas chromatography–time of flight mass spectrometry

Stadler, Sonja, Stefanuto, Pierre-Hugues, Byer, Jonathan D., Brokl, Michał, Forbes, Shari, Focant, Jean-François

Journal:

Journal of Chromatography A

Year:

2012

Language:

english

File:

PDF, 338 KB

english, 2012

44

Role of epigenetic mechanisms in epithelial-to-mesenchymal transition of breast cancer cells

Nickel, Annina, Stadler, Sonja C.

Journal:

Translational Research

Year:

2015

Language:

english

File:

PDF, 742 KB

english, 2015

45

Inter-year repeatability study of volatile organic compounds from surface decomposition of human analogues

Stadler, Sonja, Desaulniers, Jean-Paul, Forbes, Shari L.

Journal:

International Journal of Legal Medicine

Year:

2015

Language:

english

File:

PDF, 943 KB

english, 2015

46

Analysis of β-Lactam Antibiotics in Incurred Raw Milk by Rapid Test Methods and Liquid Chromatography Coupled with Electrospray Ionization Tandem Mass Spectrometry

Riediker, Sonja, Diserens, Jean-Marc, Stadler, Richard H.

Journal:

Journal of Agricultural and Food Chemistry

Year:

2001

Language:

english

File:

PDF, 91 KB

english, 2001

47

Formation of Vinylogous Compounds in Model Maillard Reaction Systems

Stadler, Richard H., Verzegnassi, Ludovica, Varga, Natalia, Grigorov, Martin, Studer, Alfred, Riediker, Sonja, Schilter, Benoit

Journal:

Chemical Research in Toxicology

Year:

2003

Language:

english

File:

PDF, 403 KB

english, 2003

48

124

Maliniemi, Pilvi, Hahtola, Sonja, Ovaska, Kristian, Jeskanen, Leila, Väkevä, Liisa, Niiranen, Kirsi, Stadler, Rudolf, Michonneau, David, Fraitag, Sylvie, Hautaniemi, Sampsa, Ranki, Annamari

Journal:

Year:

2014

Language:

english

File:

PDF, 60 KB

english, 2014

49

The molecular profile of adult T-cell acute lymphoblastic leukemia: Mutations in RUNX1 and DNMT3A are associated with poor prognosis in T-ALL

Grossmann, Vera, Haferlach, Claudia, Weissmann, Sandra, Roller, Andreas, Schindela, Sonja, Poetzinger, Franziska, Stadler, Kathrin, Bellos, Frauke, Kern, Wolfgang, Haferlach, Torsten, Schnittger, Susa

Journal:

Genes, Chromosomes and Cancer

Year:

2013

Language:

english

File:

PDF, 763 KB

english, 2013

50

Does objectively assessed sleep at five years predict sleep and psychological functioning at 14 years? – Hmm, yes and no!

Brand, Serge, Hatzinger, Martin, Stadler, Christina, Bolten, Margarete, von Wyl, Agnes, Perren, Sonja, von Klitzing, Kai, Stadelmann, Stephanie, Holsboer-Trachsler, Edith

Journal:

Journal of Psychiatric Research

Year:

2015

Language:

english

File:

PDF, 324 KB

english, 2015